Fay, Wyckoff & Wu Supplement

Gene Type non 2-fold 4-fold
2DD total 651 167.5 183.5
2DD transitions 14 11.17 16.83
2DD transversions 4.25 2.75 2
AANAT total 387 117.5 107.5
AANAT transitions 9 2 11
AANAT transversions 3.5 1.5 1
ACAT1 total 1069.5 349 231.5
ACAT1 transitions 8 10 6
ACAT1 transversions 2.5 1.5 2
ACAT2 total 993.5 303 269.5
ACAT2 transitions 11 14 15
ACAT2 transversions 5 2 8
ADH1 total 736 201 188
ADH1 transitions 11 16 21.5
ADH1 transversions 10 7.5 9
ADRB1 total 919 199 313
ADRB1 transitions 6 6 8
ADRB1 transversions 2.92 1.25 5.83
ADRB3 total 782 154 288
ADRB3 transitions 24.5 8.17 22.67
ADRB3 transversions 31.58 6.75 19.33
AHSG total 672.5 178.5 196
AHSG transitions 26.5 11 12.5
AHSG transversions 19 6 2
alpha1antitrypsin total 766.5 252 169.5
alpha1antitrypsin transitions 19 9 10
alpha1antitrypsin transversions 10 7.33 6.67
alphaacrystallin total 78 18.5 26.5
alphaacrystallin transitions 0 4 2
alphaacrystallin transversions 2 0 0
androgenreceptor total 1730 491.5 460.5
androgenreceptor transitions 7 17 13
androgenreceptor transversions 2.5 1.5 12
ANX3 total 608 230.5 130.5
ANX3 transitions 20.5 55 30.83
ANX3 transversions 15.33 4.33 24
APOA2 total 190.5 60.5 49
APOA2 transitions 2 2 2
APOA2 transversions 3.5 1.5 1
APOA4 total 742.5 266.5 179
APOA4 transitions 11 9.5 11.5
APOA4 transversions 5.5 5.5 5
APOB total 1153 371 264
APOB transitions 22 13 10
APOB transversions 19 6 5
APOC2 total 162 46 44
APOC2 transitions 7 4 4
APOC2 transversions 4.75 2.75 0.5
apolipoproteinA total 511 163 127
apolipoproteinA transitions 8 5.5 3
apolipoproteinA transversions 3.5 3.5 5.5
at3 total 78 24.5 17.5
at3 transitions 2 1 0
at3 transversions 1 1 0
ATI total 151 51.5 40.5
ATI transitions 8 3 2.5
ATI transversions 13.5 1 0
AVP total 165 45.5 44.5
AVP transitions 9 4.5 4
AVP transversions 5 4.5 6
B3AR total 782 154 288
B3AR transitions 24.5 7 21
B3AR transversions 31.42 7.08 20
BCHE total 273.5 80.5 66
BCHE transitions 0 1 3
BCHE transversions 0 0 1
BDNF total 223 67 52
BDNF transitions 0 3 2
BDNF transversions 0 0 0
Beta2anrerec total 806 247 186
Beta2anrerec transitions 6 9.5 6
Beta2anrerec transversions 3.25 2.25 0
Betaactin total 518 135.5 138.5
Betaactin transitions 0 6 14
Betaactin transversions 3 0 3
Betatub total 887 232 213
Betatub transitions 0 10 13
Betatub transversions 0 0 2
BRCA1 total 2180 835.5 401.5
BRCA1 transitions 54.5 30.5 14.5
BRCA1 transversions 22.75 9.75 8
CA1 total 514.5 146 122.5
CA1 transitions 8 8 7
CA1 transversions 4.25 1.75 2
carboxylesterase total 1106 304.5 287.5
carboxylesterase transitions 17 16.5 14.5
carboxylesterase transversions 20 7.5 6.5
CCR1 total 671 236.5 157.5
CCR1 transitions 19.5 12 8.5
CCR1 transversions 20.92 7.08 5
CCR3 total 681 213 171
CCR3 transitions 15 9 11
CCR3 transversions 14.75 2.75 3.5
CCR5 total 679.5 223.5 153
CCR5 transitions 6 8 6
CCR5 transversions 1 1 1
CCR8 total 684 240.5 140.5
CCR8 transitions 11 9 1
CCR8 transversions 8.25 1.75 2
CD4 total 876.5 275.5 222
CD4 transitions 23 10 10
CD4 transversions 14 2.5 5.5
CD59 total 202 66 53
CD59 transitions 51 20.83 15.17
CD59 transversions 98.83 23.25 24.92
CD81 total 461 135 112
CD81 transitions 3 13 10
CD81 transversions 0 1 3
CFTR total 2823 1013.5 603.5
CFTR transitions 17 23 10
CFTR transversions 5 3 7
CGB total 318.5 72 104.5
CGB transitions 17 3.67 5.33
CGB transversions 16.25 2.75 5
Cholesterase total 957 286.5 235.5
Cholesterase transitions 16 15 13
Cholesterase transversions 2.5 1.5 3
CHRM5 total 1035 310.5 250.5
CHRM5 transitions 13 6 6
CHRM5 transversions 9.5 1.5 3
chymase total 470.5 142 128.5
chymase transitions 6 2.5 5.5
chymase transversions 2 0 5
CMA1 total 471 141.5 128.5
CMA1 transitions 5 2.5 3.5
CMA1 transversions 2 0 2
CMAH total 946 321 191
CMAH transitions 8 11 4
CMAH transversions 4 1 7
CR1trim total 3740 1126 864
CR1trim transitions 61 41.67 52.33
CR1trim transversions 56.25 16.75 23
CXCR4 total 684.5 217.5 154
CXCR4 transitions 3 9 6
CXCR4 transversions 2.5 0.5 3
cyclophiln total 328 95 72
cyclophiln transitions 0 1 3
cyclophiln transversions 0 0 1
CYP11B total 938.5 315.5 246
CYP11B transitions 10 23 12
CYP11B transversions 4 4 8
CystatinC total 280 77 81
CystatinC transitions 2 2 3
CystatinC transversions 1 1 6
cytohesin1 total 764 282 148
cytohesin1 transitions 0 16 5
cytohesin1 transversions 0 0 6
cytohesin2 total 759 266 172
cytohesin2 transitions 0 15 8
cytohesin2 transversions 0 0 5
DARPP32 total 186 71.5 36.5
DARPP32 transitions 1 5 0
DARPP32 transversions 0 0 0
DAZLA total 577 171 137
DAZLA transitions 4 4 2
DAZLA transversions 3 0 1
DBH total 166 46.5 48.5
DBH transitions 1 2 6
DBH transversions 4 0 1
DopamineD1 total 862 260 216
DopamineD1 transitions 0 10 10
DopamineD1 transversions 1 0 7
DRD2 total 862.5 257.5 209
DRD2 transitions 2 8 7
DRD2 transversions 2 0 2
DRD3 total 762 225 213
DRD3 transitions 6 14.5 11.5
DRD3 transversions 1 0 2
DRD5 total 310.5 75.5 79
DRD5 transitions 1 1 2
DRD5 transversions 4.5 1 4.5
ECP total 303 100 77
ECP transitions 9 3 1
ECP transversions 8 2 3
EDN1 total 149 53.5 25.5
EDN1 transitions 2 3.5 1.5
EDN1 transversions 1 0 0
EDNRA total 346.5 124.5 57
EDNRA transitions 1 2 5
EDNRA transversions 1 0 1
EDRNB total 189.5 56 48.5
EDRNB transitions 1 0 2
EDRNB transversions 0.5 0.5 0
ELA1 total 507.5 128 138.5
ELA1 transitions 11 9 7
ELA1 transversions 4.5 2.5 2
eoderneurotox total 313.5 96 70.5
eoderneurotox transitions 9 15.5 7
eoderneurotox transversions 17.17 3.83 0.5
EPI1 total 298 87 68
EPI1 transitions 0 0 1
EPI1 transversions 0 0 0
epsilon total 287 83 71
epsilon transitions 2 2 3
epsilon transversions 1 0 0
erythropoeitin total 362.5 102 111.5
erythropoeitin transitions 9 2 8
erythropoeitin transversions 6.25 1.75 5
estrogenreceptor total 535.5 166 135.5
estrogenreceptor transitions 4 7 6
estrogenreceptor transversions 1 0 0
F10 total 321 86 76
F10 transitions 2 4 4
F10 transversions 2 0 3
F2R total 819.5 247.5 208
F2R transitions 3 9.5 7.5
F2R transversions 6.75 1.75 6.5
F7 total 306 82.5 88.5
F7 transitions 10 3 7
F7 transversions 1 2 1
F9 total 903 291 189
F9 transitions 3 7.5 3.5
F9 transversions 2 1 2
fasligand total 541.5 155.5 143
fasligand transitions 3 10 9
fasligand transversions 3 0 2
fertilinbeta total 1433 502.5 266.5
fertilinbeta transitions 40.5 14.5 10.5
fertilinbeta transversions 30 10.5 6
FGA total 460 146 99
FGA transitions 3 7 4
FGA transversions 0 0 2
FIBP total 682 219.5 169.5
FIBP transitions 0 9 6
FIBP transversions 0 0 2
FMO2 total 924.5 292 196.5
FMO2 transitions 6 13.5 8.5
FMO2 transversions 4.5 2.5 3
FPR1 total 670 180.5 187.5
FPR1 transitions 15 7.5 7.83
FPR1 transversions 10.83 5.33 3.5
FSHR total 1330.5 461 293.5
FSHR transitions 7 11 7
FSHR transversions 7.5 1.5 4
FUT1 total 709.5 182 203.5
FUT1 transitions 11 10 11
FUT1 transversions 6 0 5
FUT2 total 533.5 145 137.5
FUT2 transitions 8 10 6
FUT2 transversions 2 3 6
G6PD total 397.5 119.5 95
G6PD transitions 1 5 6
G6PD transversions 0 0 4
galactocerebrosidase total 1313 385 309
galactocerebrosidase transitions 10 15 11
galactocerebrosidase transversions 5.5 3.5 6
GDNF total 292.5 128.5 59
GDNF transitions 2 5 1
GDNF transversions 0 0 0
GH1 total 412 138 101
GH1 transitions 6 10 5
GH1 transversions 3.25 0.75 3
GHR total 1253.5 395 265.5
GHR transitions 18.5 10 6
GHR transversions 11.25 3.25 3
GNRH2 total 215 51 73
GNRH2 transitions 11 2 4
GNRH2 transversions 1.5 1.5 5
GP1BB total 374 85 159
GP1BB transitions 4 4 4
GP1BB transversions 8.42 3.58 9
GPR1 total 681.5 233 150.5
GPR1 transitions 5 9 6
GPR1 transversions 4.5 1 0.5
GPR15 total 688 229 163
GPR15 transitions 6 4 8
GPR15 transversions 2 2 2
GPR8 total 375 103 128
GPR8 transitions 7.5 7 10.5
GPR8 transversions 1 1 4
GRL total 1500.5 482.5 348
GRL transitions 15 24.5 18.5
GRL transversions 12 2 6
GSTM2 total 422.5 147.5 84
GSTM2 transitions 4 8 3
GSTM2 transversions 4 0 3
GSTP1 total 402 113.5 114.5
GSTP1 transitions 3 6 8
GSTP1 transversions 3 0 4
GUSB total 1257 381 315
GUSB transitions 23 26 23
GUSB transversions 16.25 5.75 15
H1t total 393.5 116.5 111
H1t transitions 17 7 9
H1t transversions 3 2 2
haptoglobin total 507.5 146 120.5
haptoglobin transitions 8 7 3
haptoglobin transversions 5 1 5
haptoglobin total 507.5 146 120.5
haptoglobin transitions 8 7 3
haptoglobin transversions 5 1 5
HPRT total 419 148 87
HPRT transitions 0 2 2
HPRT transversions 0 0 1
HST total 561.5 196 97.5
HST transitions 14.5 12.5 3.5
HST transversions 15 7 3.5
IAPP total 70 17.5 20.5
IAPP transitions 3 0 1
IAPP transversions 0 0 0
ICAM1 total 958.5 260.5 296
ICAM1 transitions 11.5 3 2
ICAM1 transversions 6.25 2.25 0
IFNbeta total 355 146.5 59.5
IFNbeta transitions 8 5 5
IFNbeta transversions 2 0 3
IGF2 total 135.5 42 35.5
IGF2 transitions 0 5 2
IGF2 transversions 2 1 1
IL10 total 338.5 128 67.5
IL10 transitions 3 2.5 2
IL10 transversions 2.75 1.75 0
IL11 total 351.5 99.5 146
IL11 transitions 10.83 2 9
IL11 transversions 2.25 0.42 0.5
IL15 total 312.5 121 52.5
IL15 transitions 5 3 3
IL15 transversions 2 0 1
IL16 total 253 62 75
IL16 transitions 4 3 5
IL16 transversions 4 0 3
IL1alpha total 525.5 183 104.5
IL1alpha transitions 12.5 8 7
IL1alpha transversions 12.25 2.25 2
IL2 total 285.5 112.5 58
IL2 transitions 3.5 1.5 3
IL2 transversions 1 1.5 2.5
IL3 total 270.5 91.5 67
IL3 transitions 12 4.5 1.5
IL3 transversions 7 6 0
IL4 total 285 109 65
IL4 transitions 10 2 1
IL4 transversions 1 1 0
IL6 total 402.5 137 96.5
IL6 transitions 2 4 2
IL6 transversions 1 4 3
IMPG1 total 357.5 122 72.5
IMPG1 transitions 11 3 2
IMPG1 transversions 5.5 2.5 2
INSR total 401 126 103
INSR transitions 2 3 5
INSR transversions 0 0 0
insulin total 165 51.5 44.5
insulin transitions 1.5 7.5 9
insulin transversions 0 0.5 10.5
interferong total 261 99 39
interferong transitions 6 4 3
interferong transversions 1.5 1.5 0
INV total 785 309.5 147.5
INV transitions 35.5 29.33 14.67
INV transversions 33.83 17.67 4
Irk1 total 833 271 177
Irk1 transitions 0 13 6
Irk1 transversions 0 0 1
IRS1 total 2415.5 620 684.5
IRS1 transitions 15 25.5 32.5
IRS1 transversions 10 2 17
ITGA2B total 1143 339 330
ITGA2B transitions 5 11.5 17.5
ITGA2B transversions 4.5 3.5 6
k6 total 292.5 97.5 60
k6 transitions 6 7 1
k6 transversions 0 0 0
Kallikrein total 377 95.5 100.5
Kallikrein transitions 9 2 4
Kallikrein transversions 8 1.5 2.5
L1CAM total 2427 709 608
L1CAM transitions 7 54.5 36.5
L1CAM transversions 2.5 2 13.5
LCAT total 862.5 217 240.5
LCAT transitions 4 9.5 13.5
LCAT transversions 2.5 0.5 7
LEPR total 2283 756.5 449.5
LEPR transitions 39.5 19.5 16
LEPR transversions 6.5 5.5 4
Leptin total 317.5 104.5 79
Leptin transitions 10 6 3
Leptin transversions 6 3 1
LESTR total 684.5 217 154.5
LESTR transitions 2 8 6
LESTR transversions 3.5 0.5 2
lipolipase total 925 291.5 208.5
lipolipase transitions 1 16 11
lipolipase transversions 1.5 0.5 6
LMAN1 total 983.5 333 213.5
LMAN1 transitions 13 10 8
LMAN1 transversions 3.5 1.5 2
LPA total 2763 762.5 707.5
LPA transitions 79.5 31.17 47.33
LPA transversions 47.5 11.5 24
Lysozyme total 285 97.5 61.5
Lysozyme transitions 17 2.67 1.83
Lysozyme transversions 5.5 1 0
M1 total 894 223 263
M1 transitions 0 5 11
M1 transversions 1 1 6
M1 total 894 223 263
M1 transitions 0 5 11
M1 transversions 1 1 6
MSTN total 727 248 150
MSTN transitions 2 3 2
MSTN transversions 0 0 2
MUC1 total 489 109 158
MUC1 transitions 118.42 29.67 50.83
MUC1 transversions 226.83 36.17 55.08
NGFB total 422 119 110
NGFB transitions 3 6 6
NGFB transversions 1 0 2
nicotinicrec5 total 361.5 105.5 88
nicotinicrec5 transitions 2 3 3
nicotinicrec5 transversions 2 0 2
NPY total 179 58 54
NPY transitions 1 2 3
NPY transversions 1 0 3
NTF3 total 457.5 156.5 109
NTF3 transitions 2 3 6
NTF3 transversions 1.75 0.25 3
OR93 total 607 185.5 143.5
OR93 transitions 10 8.5 5.5
OR93 transversions 4.5 2.5 0
Oviglyc total 1179.5 329 315.5
Oviglyc transitions 15.83 11 14.33
Oviglyc transversions 10.83 3.5 3.5
Oxytocin total 757.5 190.5 219
Oxytocin transitions 8 6.5 13.5
Oxytocin transversions 2 2 6
P1 total 84 54.5 14.5
P1 transitions 4 1 0
P1 transversions 0.5 0.5 1
P53 total 764.5 211 203.5
P53 transitions 10 9 11
P53 transversions 6 2 5
PCI total 454 136 103
PCI transitions 9.5 12.17 5.33
PCI transversions 7.92 4.58 2.5
PCI total 454 136 103
PCI transitions 9.5 12.17 5.33
PCI transversions 7.92 4.58 2.5
PH20 total 996.5 316 214.5
PH20 transitions 29.5 12.67 9
PH20 transversions 21.67 5.33 9.83
plasminogen total 1590 467 373
plasminogen transitions 29 21 25
plasminogen transversions 24.25 8.75 4
POMC total 511.5 145 135.5
POMC transitions 10.5 6 15
POMC transversions 5.08 0.92 4.5
PPARG2 total 979 335.5 200.5
PPARG2 transitions 2 13 3
PPARG2 transversions 0.5 1.5 2
PPP1R1A total 210 56.5 54.5
PPP1R1A transitions 0 4 0
PPP1R1A transversions 3 1 1
Prion total 497 116 119
Prion transitions 6 6 14
Prion transversions 3 0 3
prl total 431 140.5 106.5
prl transitions 2 2 7
prl transversions 3 0 2
Prophos1 total 210 56.5 54.5
Prophos1 transitions 0 4 0
Prophos1 transversions 3 1 1
Pros1 total 1232 413 251
Pros1 transitions 13 14 9
Pros1 transversions 9.5 3.5 5
ProstaglandinD total 369.5 100 100.5
ProstaglandinD transitions 2 0 1
ProstaglandinD transversions 1.5 1.5 2
PSA total 513 130 140
PSA transitions 15 5.5 9
PSA transversions 11.5 3 5
PSP94 total 226.5 75 40.5
PSP94 transitions 13 2.83 3.5
PSP94 transversions 9.42 2.75 1.5
psp94mh total 226.5 75 40.5
psp94mh transitions 13 2.83 3.5
psp94mh transversions 9.42 2.75 1.5
PST total 306 101 70
PST transitions 0 2 3
PST transversions 0 0 1
PTAFR total 411 115.5 97.5
PTAFR transitions 6 4 7
PTAFR transversions 2.25 0.75 5
PTH total 224 73 48
PTH transitions 3 2 1
PTH transversions 0 0 2
RAD17 total 1270.5 480.5 259
RAD17 transitions 12 10 10
RAD17 transversions 5.5 4.5 1
RPE65 total 1038.5 331 229.5
RPE65 transitions 1 4 7
RPE65 transversions 0 1 2
RPS4 total 506 163 120
RPS4 transitions 0 4 3
RPS4 transversions 0 0 0
RPS4 total 507 158.5 123.5
RPS4 transitions 10 11 8.83
RPS4 transversions 2.58 0.58 3
Sel total 551.5 187 101.5
Sel transitions 62.5 55.5 30
Sel transversions 118.79 40.54 39.67
Sel total 731 235 141
Sel transitions 98 65.67 38.5
Sel transversions 154.04 59.79 54
SELL total 738 246 132
SELL transitions 10 8 5
SELL transversions 5.5 3.5 2
SEMG2 total 1135 399.5 211.5
SEMG2 transitions 55.5 16.5 5.5
SEMG2 transversions 34 9.5 4
somatostatin total 218.5 67 62.5
somatostatin transitions 0 1 2
somatostatin transversions 0 0 2
SP17 total 296 102.5 54.5
SP17 transitions 5 2 0
SP17 transversions 0 0 0
STC2 total 570.5 202 133.5
STC2 transitions 3 7 4
STC2 transversions 1 1 2
Ste1 total 496 158.5 122.5
Ste1 transitions 9.5 3.83 8.67
Ste1 transversions 7.75 3.25 2
STRL33 total 668 206 152
STRL33 transitions 11 7.5 6
STRL33 transversions 5 2 2.5
STX total 350 108 91
STX transitions 0 10 2
STX transversions 0 1 1
TBXA2R total 650.5 147 231.5
TBXA2R transitions 5 9 11
TBXA2R transversions 4 1 6
Thioredoxin total 211.5 62 41.5
Thioredoxin transitions 3 0.5 0.5
Thioredoxin transversions 1 1 0
THY1 total 300.5 87 86.5
THY1 transitions 0 2 4
THY1 transversions 2 0 3
TRKB total 222 67.5 52.5
TRKB transitions 0 7 4
TRKB transversions 0 0 1
Tumnecfact total 257.5 73.5 71
Tumnecfact transitions 1.5 4 5
Tumnecfact transversions 3.75 0.75 0
ZP2 total 1446.5 436 352.5
ZP2 transitions 28 24 16.5
ZP2 transversions 9.25 6.25 4
Type: total is the total number of sites, transitions and tranversions are the number of transition and transversion changes.
Non, 2-fold and 4-fold refer to codon degeneracy.