c32 standard sjd standard Inbred lines to ZIRC
Linkgage 0 1
Group Position allele size from web site (zfish. SJC SJA SJD when scores of tested strains match
annealing Primers (cM) wustl.edu) or archival assays (c32) (ab) those of standards, c32=0 and sjd=1
temps LG 1
55 z9217 10 180 150 0 0 1 alleles are listed as 0 or 1 if match our standard DNA
60 fc27h08 24 120 290 0 0/1 1 for C32 or SJD, respectively
55 z1154 43 240 180 0 300 1 otherwise we show PCR product size
z11154 67 290 450 0 330 1
55 z24694 70 190 210 0 230 1
55 z6802 80 190 210 0 0/220 1
60 z22347 95 150 120 0 210 1
LG 2
60 z1484 0 190 180 0/1 0/160 1
55 z4469 18 170 190 0 150 1
55 z4662 46 280 260 0 1 1
60 z13281 64 150 180 0 0 1
55 z1406 84 200 280 0 0/210 1
55 z7358 103 190 210 0 0 1
LG3
55 z3929 3 110 200 0 130 1
60 z3439 28 240 260 0 300 1
55 gof14 39 no amp 310 no amp 180 1
60 z22555 77 250 150 0 180 1
60 z3725 95 260 290 0 0 1
55 z1401 129 220 200 0 390 1
LG 4
60 z20533 10 230 200 0 220 1
55 z6908 20 290 300 0 0 1
60 z11876 30 180 185 0 0 1
55 z20450 55 280 290 0 0/1 1
55 z984 95 210 205 0 0 1
55 z25562 111 250 380 0 0/300 0/1
LG 5
60 z3902 11 210 200 0 0 1
55 z5552 36 220 200 0 0 1
55 z6614 61 190 210 0 200/160 1
60 z13866 78 210 280 0 0 0/1
55 z5538 107 210 310 0 0 0
60 z4299 133 280 300 0 0/320 1
55 z34450 145 200 180 0 0 1
LG 6
55 z1265 0 160 150 0 155 1
60 z9870 32 120 140 0 0 1
55 z20932 52 210 300 0 290 1
60 z10183 74 280 210 0 240 1
60 z1050 100 200 210 0 0 1
60 z19665 121 180 170 0 185 1
60 gof20 141 240 260 0 0 1
LG 7
55 z177 2 150 120 0/1 110 1
60 z8252 29 220 200 0 1 1
55 z4999 55 260 290 0 0 1
55 z10487 83 130 110 0 100 1
55 z8604 98 280 250 0 0/330 0/1
60 z1239 125 180 220 0 1/270 1
60 z1535 141 140 120 0 1 1
60 fj30f10 162 110 190 0 0 1
LG 8
60 z1637 0 180 150 0 130 1
60 z9420 12 320 150 0 155 1
55 z987 29 200 280 0/120 0 0/1
55 z789 66 195 210 0 0 0/1
60 fk30a11 75 140 180 0 120 0/1
58 z8703 101 300 280 0 0 1
LG 9
60 z10130 2 240 190 0/1 0/300 1
60 z5080 43 210 310 0 0 1
60 z1660 54 250 240 0 260 1
60 z10789 79 180 200 0 0 1
55 z7807 89 250 230 0 0 1
60 z106 116 195 190 0 185 1/200
LG 10
60 z9208 2 200 180 0 170 1
60 z8146 14 180 200 0 0 1
60 z3835 42 150 200 0 0 1
60 z11229 72 110 130 0 0 1
55 z14193 97 230 160 0 180 1
60 z6754 105 160 120 0 140 1
LG 11
60 z3527 8 210 310 0 0 1
60 z7517 21 210 200 0 0 1
60 z8032 30 150 160 0 155/140 1
55 z3412 58 180 150 0 140 0/1
60 z22038 72 190 210 0 195 0/1
60 z13411 88 280 300 0 200 1
60 z3362 100 190 210 0 180 1
LG 12
60 z1176 0 240 270 0/1 0 1
60 z6920 25 220 225 1 0 1
55 z1473 37 100 120 1 1 1
60 z4188 68 190 220 0 210 1
60 z3801 77 160 140 0 150 1
60 z10364 90 200 180 0 175 1
55 z1312 112 120 220 0 180 1
LG 13
55 z1531 0 210 300 0 0 1
55 z9564 20 170 180 0 0 0/1
55 z5395 42 210 180 0/1 215 0/1
60 z13250 59 210 290 0 0 0/1
60 z6657 95 130 190 0/1 170/120 1
55 fj03e12 110 120 100 0 0 1
LG 14
60 z8471 5 300 200 0 0/250 1
55 z41025 39 150 130 0 0 1
55 z11725 55 250 240 0 0 1
60 z1688 87 300 290 0 0 1
60 z618 110 150 200 0 170 1
LG 15
55 z34706 8 200 250 0 240 1
60 z21982 30 200 180 0 0 0/1
60 z3358 54 280 310 0/1 300 1
55 z9189 68 290 240 0 0 1
60 z13822 84 160 150 0 1 1
55 z5223 110 180 210 0 0 1
LG 16
60 z1642 0 210 230 0 0 1
60 z21155 24 140 110 0 115 0/1
60 z3104 54 250 300 0 370 0/1
60 z10632 85 190 220 0 0/210 1
60 z4670 98 190 150 0 0/1 1
55 z15453 116 205 195 0/210 210 1
LG 17
55 z652 0 120 130 0 0 1
60 z1490 10 205 200 1 1/210 1
60 z22674 33 180 200 0 0 1
60 z15715 57 140 110 0 120 1
55 z1408 69 220 400 0 410 1
60 z4053 78 200 210 0 205 1
55 z3123 104 140 160 0 1 1
LG 18
55 z5231 12 120 110 0 0 0
55 z13329 21 240 220 0 250 0/1
60 z8488 45 120 200 0 140 1
60 z737 71 180 170 0 0/165 1
60 z9941 101 280 310 0 0/300 1
60 z1417 124 140 130 0 135 1
LG 19
60 z1625 3 220 150 0 0 1
55 z3782 24 120 190 0 0 1
55 z3816 52 160 170 0 0 1
60 z22532 65 230 320 0 0 1
55 z6661 92 150 140 0 0 1
LG 20
60 z9334 6 130 150 0/1 140 1
55 z3824 44 210 270 0 0 1
60 z10756 55 200 230 0/1 190 1
60 z9794 76 210 180 1 0 1
60 z7171 100 300 220 0 0 1
55 z374 113 180 200 0 0 1
LG 21
55 z14506 8 180 200 0 1 190/1
55 z7423 22 290 340 0 0 1
60 z21106 52 290 310 0 300 1
60 z4425 72 180 150 0 160/130 1
55 z42626 95 290 210 0 0 1
60 z11113 110 190 240 0/220 220/200 1
LG 22
55 z11752 0 150 180 0 0 0/1
60 z10673 20 280 210 0 310 1
55 z13223 46 210 180 0 0 1
55 z11679 57 190 200 0 230 0
60 z28677 100 290 310 0 0 1
LG 23
60 z11407 0 260 210 0 0 1
55 z4003 22 230 220 0 0/250 1
60 z20039 42 180 170 0/1 200 1
55 z4421 68 200 180 0/1 0 1
60 z3525 94 160 180 1 0 1
55 fc96f03 114 120 150 0/1 170 1
LG 24
55 z1584 6 180 190 0 1 1
60 z9852 29 280 260 0 0 1
55 z249 59 150 140 0 0 1
60 z9325 74 210 250 0 0 1
LG 25
55 z11092 0 180 140 0 0 1
55 gof1 19 180 210 0 140 1
60 z20832 39 210 290 0 0/220 1
60 z8224 54 230 260 0 0/250 1
60 z3528 81 190 240 0 170 1
60 z1431 108 180 210 0 190 1
Total polymorph.: 15/151 24/151 18/151
fixed for sjD allele 4 8 130
fixed for sjC allele 133 64 3
fixed for other allele na 55 na
Note: we imagine that correspondence of sjA bands to that of sjD
is coincidental, and doesn't indicate identity by descent. In
constrast, because sjC and sjA are each derived primarily from
AB, we imagine that the majority of segments with shared allele
sizes are identical by descent from an origin in the AB line of
Walker.