| Date | Presenter | Topic/Paper |
| 08/26 | Stephen Lincoln | Guest Speaker, Incyte Pharmaceuticals Inc. |
| 09/02 | Matthew Clark | Guest Speaker, Max-Plank Institute of Molecular Genetics Oligonucleotide hybridization normalization of arrayed cDNA libraries |
| 09/09 | Sean Eddy | Software Licensing in Academic Bioinformatics |
| 09/16 | Robbie Klein | Can we use large-scale distributed computing in computational biology? |
| 09/23 | Gary Stormo | Gene rearrangements in the genomes of some ciliates |
| 09/30 | David Messina | The Laws and Ethics of Genetic Testing: More than an Afterthought? |
| 10/07 | Tom Blackwell | Astronomy and Genetics: Fine scale inhomogeneities in mutation exposure |
| 10/14 | Mark Gerstein | Guest Speaker: Yale University Comparing Genomes in terms of Protein Structure: Surveys of a Finite Parts List |
| 10/21 | Zhirong Bao | Historical Genetics: The Parentage of Wine Grapes of Northeastern France |
| 10/28 | Ian Korf | Junebug: Object-oriented software for genomic analysis |
| 11/04 | Robin Dowell | Software Evaluation and Benchmarking; Leonid Meteor Shower |
| 11/11 | Debraj GuhaThakurta | Prediction of Eukaryotic mRNA Translational Properties |
| 11/18 | Jim McCarter | Protein Evolution by Molecular Breeding |
| 11/25 | THANKSGIVING | |
| 12/02 | Elena Rivas | Optimzing Smith-Waterman Alignments |
| 12/09 | Tom Jones | Ethics of Human Transformation |
| 12/16 | Jan Amend | Guest Speaker: Earth & Planetary Sciences The natural home of Pyrococcus, Aquifex, Archaeoglobus, and other hyperthermophiles -- A geochemist's perspective |
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